The detailed information of tRNA gene sequence


Sequence ID>A178000121
Genome IDCP001932
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatrialba magadii ATCC 43099 [CP001932]
Start position on genome 65790
End posion on genome 65637
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggaaagtga
tRNA gene sequence 
GCCCGGGTGGCTTAGCTGGACATAGCGCCGCACTCATAATGCGGAGATCGAGGGTTCGGA
GCCCTCCCCGGGCAtaa
Downstream region at tRNA end position 
aactatttgt
Secondary structure (Cloverleaf model)
>A178000121	Met	CAT
                   a      Ataa aactatttgt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          G A
                    T     C T C C C     G
      C G A        G      | | | | |     G
    T       T T C G       G A G G G     C
    G         | | |                 T T
    G       T A G C
      A C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=80 (in A-loop)
GGGTTCAGAGATTCGGTGCGGTTTCGCCTTGGAAGCCTCCGTGTCCCCACGAGGACTCTGCCGAGCCTCG
GACCTGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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