The detailed information of tRNA gene sequence


Sequence ID>A178000161
Genome IDCP002069
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanohalobium evestigatum Z-7303 [CP002069]
Start position on genome 1364132
End posion on genome 1364236
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctaacattaa
tRNA gene sequence 
GGGCCGGTAGATCAGCATGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCGAA
TCCCGACCGGTCCAtaa
Downstream region at tRNA end position 
agattttttg
Secondary structure (Cloverleaf model)
>A178000161	Ala	GGC
                   a      Ataa agattttttg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     G
    A       C T A G       T C G G G     C
    T       | | | |                 T T
    G       G A T C
      G A A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A *
                    G G C
intron: position=38, length=31 (in A-loop)
ATTGTGTTGCACAGATGCAATACATCCAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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