The detailed information of tRNA gene sequence


Sequence ID>A178000167
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 2115720
End posion on genome 2115814
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
taacttaccc
tRNA gene sequence 
GCGGCCGTAGTCTAGCCTGGTCTAGGATGGCGGCCTTCCGAGCCGCAGAACCCGGGTTCG
AATCCCGGCGGCCGCACCA
Downstream region at tRNA end position 
tcgaaatcgt
Secondary structure (Cloverleaf model)
>A178000167	Gly	TCC
                   c      ACCA tcgaaatcgt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        G     AGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T C C
intron: position=38, length=16 (in A-loop)
AGCAATAAACGTGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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