The detailed information of tRNA gene sequence


Sequence ID>A178000185
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 2182666
End posion on genome 2182576
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aagttgctct
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGTACCGGACTTTTAATCCGGCTGTCTCGGGTTCGAA
TCCCGACGGGCCCGCtc
Downstream region at tRNA end position 
acttatcggg
Secondary structure (Cloverleaf model)
>A178000185	Lys	TTT
                   t      GCtc acttatcggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       T C G G G     C
    A       | | | +                 T T
    G       G A G T
      G T A        A     CTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T T T
intron: position=38, length=16 (in A-loop)
ACTGCAATAGAAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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