The detailed information of tRNA gene sequence


Sequence ID>A178000208
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 503215
End posion on genome 503120
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcataaaaat
tRNA gene sequence 
GCCCCGGTGGCCGAGTGGTGAAGGCGTTGGGCTGCAGACCCAATCTTCCCGGGTTCGAAT
CCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
ggaaatttta
Secondary structure (Cloverleaf model)
>A178000208	Cys	GCA
                   t      TCCA ggaaatttta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      G A          G     TCTTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    G C A
intron: position=38, length=20 (in A-loop)
GATCAATTTCTAATGCAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK