The detailed information of tRNA gene sequence


Sequence ID>A178000211
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 917481
End posion on genome 917381
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
attaactcga
tRNA gene sequence
GGGCCCGTAGCTCAGCCAGGTTGGAGCGCCCGGCTGATAACCGGGAGGTCCCGGGTTCGA
ATCCCGGCGGGCCCACCA
Downstream region at tRNA end position
attcgttttc
Secondary structure (Cloverleaf model)
>A178000211	Ile	GAT
                   a      ACCA attcgttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T G          G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    G A T
intron: position=38, length=23 (in A-loop)
TGATATAATAAAATAACGCAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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