The detailed information of tRNA gene sequence


Sequence ID>A178000212
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 1137071
End posion on genome 1137172
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aattaaacct
tRNA gene sequence 
GCGGGGGTGCCCGAGCCTGGTCAAAGGGGGCGGACTTAAGATCCGCTGGCGAAGGCCTGC
GTGGGTTCGAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
aaagctgaat
Secondary structure (Cloverleaf model)
>A178000212	Leu	TAA
                   t      ACCA aaagctgaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  T         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=14 (in A-loop)
ATCAAAAATAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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