The detailed information of tRNA gene sequence


Sequence ID>A178000225
Genome IDCP002551
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium lacus AL-21 [CP002551]
Start position on genome 2507649
End posion on genome 2507759
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataagccat
tRNA gene sequence 
GCCGGGGTGGCTCAGTTGGTTAGAGCGCACGGCTCATAACCGTGAGGCCGCGGGTTCGAA
TCCCGCCCCCGGCACtc
Downstream region at tRNA end position 
aatatttgtg
Secondary structure (Cloverleaf model)
>A178000225	Met	CAT
                   t      ACtc aatatttgtg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=36 (in A-loop)
GGGTATTAAGCAAGTGCTCTGACTTTTTCCTGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK