The detailed information of tRNA gene sequence


Sequence ID>A178000234
Genome IDCP002590
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus uzoniensis 768-20 [CP002590]
Start position on genome 1549994
End posion on genome 1550091
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gggggattcg
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGCGGGACTCGAGATCCCGTCCCCGCGAGGGGGCG
TGGGTTCAAATCCCACCCCCGGCGtct
Downstream region at tRNA end position 
ttctactccc
Secondary structure (Cloverleaf model)
>A178000234	Ser	CGA
                   g      Gtct ttctactccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TCCCCGCGAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C G A
intron: position=38, length=14 (in A-loop)
ACCTGGAGCAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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