The detailed information of tRNA gene sequence


Sequence ID>A178000255
Genome IDCP002817
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius N8 [CP002817]
Start position on genome 515205
End posion on genome 515298
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
atgttatagT
tRNA gene sequence
GGGCCCGTAGCTTAGCCCGGTAGAGCGCCCGGCTCATAACCGGGTGGTCCGGGGTTCAAG
TCCCCGCGGGCCCAGta
Downstream region at tRNA end position
tattagaact
Secondary structure (Cloverleaf model)
>A178000255	Met	CAT
                   T      AGta tattagaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       T T C G       C G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=18 (in A-loop)
AACTATGTATGTGGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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