The detailed information of tRNA gene sequence


Sequence ID>A178000260
Genome IDCP002817
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius N8 [CP002817]
Start position on genome 1188483
End posion on genome 1188393
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atttttattt
tRNA gene sequence 
GCCGCCGTAGCTCAGCACGGCCAGAGCGCTGGCCTTGTAAGCCAGTGGTCCCGGGTTCAA
ATCCCGGCGGCGGCTtac
Downstream region at tRNA end position 
ttcctatcct
Secondary structure (Cloverleaf model)
>A178000260	Thr	TGT
                   t      Ttac ttcctatcct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    A C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=16 (in A-loop)
AGGATGGCTTCAGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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