The detailed information of tRNA gene sequence


Sequence ID>A178000274
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 262509
End posion on genome 262616
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
acgaaacggt
tRNA gene sequence 
GCCGCCGTAGCTCAGCGGGCAGAGCGCCGGCCTTGTAAGCCGGTGGTCCCGGGTTCAAGT
CCCGGCGGCGGCTCCA
Downstream region at tRNA end position 
ctctccaact
Secondary structure (Cloverleaf model)
>A178000274	Thr	TGT
                   t      TCCA ctctccaact
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=32 (in A-loop)
CGGCCTGGCCTCGCTCCGAGGTCGCCCAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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