The detailed information of tRNA gene sequence


Sequence ID>A178000300
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 2258762
End posion on genome 2258670
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position
gaggtggtga
tRNA gene sequence
GCGCCGATGGTCTAGTGGTTATGACTTGGGCCTTCCAAGCCCAAAACCCGGGTTCGAATC
CCGGTCGGCGCAtct
Downstream region at tRNA end position
tgttttgtgg
Secondary structure (Cloverleaf model)
>A178000300	Gly	TCC
                   a      Atct tgttttgtgg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T C T G       C C G G G     C
    G         | | |                 T T
    T       T G A C
      T A          T     AAAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=21 (in A-loop)
AGCGGCAGGGATCGCGGAGCA
Intron
Comment/Decision
Genome/Seq. Info.-

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