The detailed information of tRNA gene sequence


Sequence ID>A178000308
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 579773
End posion on genome 579903
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cctatcctgt
tRNA gene sequence 
GCCCGAGTGGGGTAGCTTGGATATCCTAGGGGCCTGCGGAGCCCCGGACCCGGGTTCGAA
TCCCGGCTCGGGCACtg
Downstream region at tRNA end position 
atacgtattt
Secondary structure (Cloverleaf model)
>A178000308	Arg	GCG
                   t      ACtg atacgtattt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     G
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     GGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C G
intron: position=38, length=56 (in A-loop)
AAAGCCCCTTTCTTAAAAAGAAAGCGGCTTTATCTGGAAAGAAGGGGTTTGCAGGC
Intron
Comment/Decision
Genome/Seq. Info.-

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