The detailed information of tRNA gene sequence


Sequence ID>A178000314
Genome IDCP003243
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella conradii HZ254 [CP003243]
Start position on genome 136105
End posion on genome 136193
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gcatggcttt
tRNA gene sequence 
GGACTCGTGGGGTAGCCAGGATATCCTACCGGGCTTCGGACCCGGCGACCCGCGTTCAAA
TCGCGGCGAGTCCGCtc
Downstream region at tRNA end position 
ctatataaaa
Secondary structure (Cloverleaf model)
>A178000314	Arg	TCG
                   t      GCtc ctatataaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C G C     A
    C C G A        G      | | | | |     A
  A         T G G G       C C G C G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T C G
intron: position=38, length=14 (in A-loop)
ACTTCCAGGAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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