The detailed information of tRNA gene sequence


Sequence ID>A178000326
Genome IDCP003321
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [CP003321]
Start position on genome 1336482
End posion on genome 1336379
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaataatgat
tRNA gene sequence 
GCCGGGGTAGCTTAGCTCGGTAGAGCGCCGGGCTGTTAACCCGGTGGTCCGGGGTTCGAG
TCCCCGCCCCGGCGCtg
Downstream region at tRNA end position 
ctcactgaat
Secondary structure (Cloverleaf model)
>A178000326	Asn	GTT
                   t      GCtg ctcactgaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     G
    T       T T C G       C G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=29 (in A-loop)
ACCGCTTAAACGAGAAGCCTGGTGCGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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