The detailed information of tRNA gene sequence


Sequence ID>A178000343
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 86553
End posion on genome 86464
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcatagtctg
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCCGCCCTTACAAGGCGGAGGCCCGGGGTTCAA
GTCCCCGCGGGCCCACta
Downstream region at tRNA end position 
aaccctcgca
Secondary structure (Cloverleaf model)
>A178000343	Val	TAC
                   g      ACta aaccctcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A *
                    T A C
intron: position=38, length=14 (in A-loop)
AGCAAGGCTAGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK