The detailed information of tRNA gene sequence


Sequence ID>A178000364
Genome IDCP004049
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomethylophilus alvi Mx1201 [CP004049]
Start position on genome 244338
End posion on genome 244227
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttgaatcagt
tRNA gene sequence 
CCCCACCTAGCTCAGACTGGCTAGAGCGGCTGACTGTAGATCAGCAGGTCCCCTGTTCAA
ATCAGGGGGTGGGGACCA
Downstream region at tRNA end position 
cttgtgattc
Secondary structure (Cloverleaf model)
>A178000364	Tyr	GTA
                   t      ACCA cttgtgattc
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G          T A
                    T     G G G A C     A
    C A G A        A      | | | | |     A
  T         C T C G       C C C T G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=34 (in A-loop)
AGTGTTCTCGGAGAGATCCGATACAGCCGCTGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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