The detailed information of tRNA gene sequence


Sequence ID>A178000365
Genome IDCP004050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter sp. AbM4 [CP004050]
Start position on genome 226731
End posion on genome 226619
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagtataaT
tRNA gene sequence 
GCCGGGGTGGCTCAGCTGGTTAGAGCGCACGGCTCATAACCGTGAGGCCGCGGGTTCGAA
TCCCGCCCCCGGCATat
Downstream region at tRNA end position 
aaattatccc
Secondary structure (Cloverleaf model)
>A178000365	Met	CAT
                   T      ATat aaattatccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=37 (in A-loop)
GGGTTTTTTAGCTATGCTCTGACTGAATTCCTGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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