The detailed information of tRNA gene sequence


Sequence ID>A178000370
Genome IDCP004145
Search identical group
Phylum/ClassUnclassified
SpeciesFerroplasma acidarmanus Fer1 [CP004145]
Start position on genome 1413926
End posion on genome 1414014
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttcataa
tRNA gene sequence 
GCCGGGGTGGCTCAGTTGGTAGAGCGTCGGACTCATAATCCGAAGGCCTCGGGTTCAATC
CCCGACCCCGGCAtgt
Downstream region at tRNA end position 
taataaaaat
Secondary structure (Cloverleaf model)
>A178000370	Met	CAT
                   a      Atgt taataaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     A G C C C     A
      T G A        G      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=16 (in A-loop)
AGTGAAAAACTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK