The detailed information of tRNA gene sequence


Sequence ID>A178000374
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 1448473
End posion on genome 1448373
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gggtaggaaT
tRNA gene sequence 
GCGGGGGTTGCCGAGCCAGGCCAAAGGCGGTGGACTCAAGATCCACTCCCGAAGGGGTCC
GAGGGTTCAAATCCCTCCCCCCGCATga
Downstream region at tRNA end position 
attctcttgt
Secondary structure (Cloverleaf model)
>A178000374	Leu	CAA
                   T      ATga attctcttgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        T      | | | | |     A
  A         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCCCGAAGGGGTCC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=14 (in A-loop)
GCCTTTGGTGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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