The detailed information of tRNA gene sequence


Sequence ID>A178000378
Genome IDCP005962
Search identical group
Phylum/ClassEuryarchaeota
SpeciesSalinarchaeum sp. Harcht-Bsk1 [CP005962]
Start position on genome 928458
End posion on genome 928353
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcggaatcga
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTTATAGCGCCCGGCTCATAACCGGGTGGTCCTGGGTTCGA
ATCCCAGCGGGCCCACtt
Downstream region at tRNA end position 
cgatctcact
Secondary structure (Cloverleaf model)
>A178000378	Met	CAT
                   a      ACtt cgatctcact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C T G A        A      | | | | |     G
  C         T T C G       C T G G G     C
  G           | | |                 T T
  G         T A G C
    T T A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=30 (in A-loop)
TCGGCGTCGCGATTCGCGGTGCCGTGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK