The detailed information of tRNA gene sequence


Sequence ID>A178000379
Genome IDCP005962
Search identical group
Phylum/ClassEuryarchaeota
SpeciesSalinarchaeum sp. Harcht-Bsk1 [CP005962]
Start position on genome 2771867
End posion on genome 2771726
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccagagcga
tRNA gene sequence 
GCCCGGGTGGCTTAGCTGGACATAGCGCCGCACTCATAATGCGGAGATCGAGGGTTCGAA
GCCCTCCCCGGGCACtg
Downstream region at tRNA end position 
ctttccgcaa
Secondary structure (Cloverleaf model)
>A178000379	Met	CAT
                   a      ACtg ctttccgcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          G A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    T       T T C G       G A G G G     C
    G         | | |                 T T
    G       T A G C
      A C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=67 (in A-loop)
GGGTTCCGAGCTTCGGTGCGGAGTTCGCATGTCCGAAACGGGGACTGCCGAGCCTCGAACCTGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK