The detailed information of tRNA gene sequence


Sequence ID>A178000387
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 716112
End posion on genome 716014
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aatgacctta
tRNA gene sequence
GGGCCCGTAGCTCAGCCAGGTGGAGCACCCGGCTCATAACCGGGGGGTCCCGGGTTCGAA
TCCCGGCGGGCCCACCA
Downstream region at tRNA end position
tatgttggga
Secondary structure (Cloverleaf model)
>A178000387	Met	CAT
                   a      ACCA tatgttggga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T G        A     GGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=22 (in A-loop)
AGCGCGCGCCGCGCGCTGGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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