The detailed information of tRNA gene sequence


Sequence ID>A178000388
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 767060
End posion on genome 766954
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttttttactg
tRNA gene sequence 
GCGGGGGTGCCCGAGCTAGGACAAAGGGGGCGGACTCAGGCTCCGCTGGCGTAGGCCTGC
CCGGGTTCGAATCCCGGCCCCCGCACCA
Downstream region at tRNA end position 
ctttctatcc
Secondary structure (Cloverleaf model)
>A178000388	Leu	CAG
                   g      ACCA ctttctatcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     G
  A         G C C C       C C G G G     C
  G           | | |                 T T
  G         A G G G
    A C A A        G     TGGCGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       G *
                    C A G
intron: position=38, length=19 (in A-loop)
ATCAGTTAAAAGATGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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