The detailed information of tRNA gene sequence


Sequence ID>A178000389
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 978172
End posion on genome 978074
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcgaactcg
tRNA gene sequence 
GCCCCGGTAGCTCAGCCGGTGGAGCGTCGGCCTCGTAAGCCGAAGGTCCCGGGTTCAAAC
CCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
tttttgtgtt
Secondary structure (Cloverleaf model)
>A178000389	Thr	CGT
                   g      TCCA tttttgtgtt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=23 (in A-loop)
AGAGGCATGGAGAGGTTCGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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