The detailed information of tRNA gene sequence


Sequence ID>A178000396
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 1394441
End posion on genome 1394342
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
ggtggatggg
tRNA gene sequence
GCCGCCGTAGCTCAGCAGGCAGAGCGCCGGCCTTGTAAGCCGGTGGTCGCGGGTTCAAGT
CCCGCCGGCGGCTCCA
Downstream region at tRNA end position
ctaataatcc
Secondary structure (Cloverleaf model)
>A178000396	Thr	TGT
                   g      TCCA ctaataatcc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     A
    A       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=24 (in A-loop)
ACGACTTTAACTCTTGCGCGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK