The detailed information of tRNA gene sequence


Sequence ID>A178000428
Genome IDCP007493
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1505 [CP007493]
Start position on genome 1370301
End posion on genome 1370197
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
cgcactaaaa
tRNA gene sequence
GCCCCGGTAGCTCAGCTCCGGTGGAGCGTCGGCCTTGTAAGCCGAAGGTCCCGGGTTCAA
ATCCCGGCCGGGGCTCCA
Downstream region at tRNA end position
ttttttgcgt
Secondary structure (Cloverleaf model)
>A178000428	Thr	TGT
                   a      TCCA ttttttgcgt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  C         | | | |                 T T
  G         G A G C
    G T G          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T G T
intron: position=38, length=27 (in A-loop)
AGGTCGAGTGTTTGGGGGCTTCGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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