The detailed information of tRNA gene sequence


Sequence ID>A178000448
Genome IDCP009502
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina thermophila CHTI-55 [CP009502]
Start position on genome 1335045
End posion on genome 1335237
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcttgttaa
tRNA gene sequence 
GGGGCTGTGGCCTAGTCTGGTAAGGCGATGGGCTCCAGACCCGTCGATCGTGAGTTCGAA
TCTCACCAGCCCCACCt
Downstream region at tRNA end position 
ttttttaatt
Secondary structure (Cloverleaf model)
>A178000448	Trp	CCA
                   a      ACCt ttttttaatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    C       T C C G       G T G A G     C
    T       | | | |                 T T
    G       A G G C
      G T A        G     CGATC
                    A - T
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    C C A
intron: position=38, length=117 (in A-loop)
CGGATAAATGATGAACAACGGGTCTACCGAGTCTTTCCCGACGGGGCAGGACAATGAGGAGCCGTTGGAG
CACTGATAGATGCTCACCAGAAACTGTACTAGCAGTTGTTCGGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK