The detailed information of tRNA gene sequence


Sequence ID>A178000517
Genome IDCP010514
Search identical group
Phylum/ClassNanoarchaeota
SpeciesCandidatus Nanopusillus acidilobi 7A [CP010514]
Start position on genome 26452
End posion on genome 26363
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttatgtataa
tRNA gene sequence 
GGGCCCGTAGCTCAGAGGTGGAGCGCCGGCCTTATAAGCCGGAGGTCAGGGGTTCGAGTC
CCCTCGGGCCCAtta
Downstream region at tRNA end position 
atagtttaat
Secondary structure (Cloverleaf model)
>A178000517	Ile	TAT
                   a      Atta atagtttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C C C C     A
        G A        A      | | | | |     G
      A     C T C G       A G G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T A T
intron: position=38, length=18 (in A-loop)
AGGCTACGCTCCTAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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