The detailed information of tRNA gene sequence


Sequence ID>A178000556
Genome IDCP011097
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosotenuis cloacae SAT1 [CP011097]
Start position on genome 391107
End posion on genome 391014
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gattttttta
tRNA gene sequence 
GGGCCGGTAGCTCAGCTTGGCTGGAGCGTTCGACTGATAATCGAAAGGTCGAGAGTTCGA
ATCTCTCTCGGCCCACCA
Downstream region at tRNA end position 
ttttacaaac
Secondary structure (Cloverleaf model)
>A178000556	Ile	GAT
                   a      ACCA ttttacaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C T C T C     A
    T C G A        A      | | | | |     G
  T         C T C G       G A G A G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    G A T
intron: position=38, length=16 (in A-loop)
AAACAACCTTTCAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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