The detailed information of tRNA gene sequence


Sequence ID>A178000561
Genome IDCP011564
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
Start position on genome 1661504
End posion on genome 1661354
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ggcgaagtga
tRNA gene sequence
GCCCGGGTGGCTTAGCTGGTCATAGCGCCGCACTCATAATGCGGAGATCGAGGGTTCAAA
ACCCTCCCCGGGCAttc
Downstream region at tRNA end position
tccgaggaac
Secondary structure (Cloverleaf model)
>A178000561	Met	CAT
                   a      Attc tccgaggaac
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          A A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    T       T T C G       G A G G G     C
    G         | | |                 T T
    G       T A G C
      T C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=77 (in A-loop)
GGGTTCAGAGAATCGGTGCGGCCGCCATTTGGCGGCTCCCATGTCCGAGAGGCGCGCCCGAGCCTCGAAC
CTGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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