The detailed information of tRNA gene sequence


Sequence ID>A178000586
Genome IDCP012173
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS50-2 [CP012173]
Start position on genome 99783
End posion on genome 99694
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position
gtagtttcgT
tRNA gene sequence
GCCGCCGTAGCTCAGCCCGGGAGAGCACCCGGCTGAAGACCGGGTTGTCCGGGGTTCAAG
TCCCCGCGGCGGCATtt
Downstream region at tRNA end position
cttgaatttt
Secondary structure (Cloverleaf model)
>A178000586	Phe	GAA
                   T      ATtt cttgaatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        A     TTGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G A A
intron: position=38, length=14 (in A-loop)
ACTTCGGTATAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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