The detailed information of tRNA gene sequence


Sequence ID>A178000613
Genome IDCP012174
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS120-1 [CP012174]
Start position on genome 2052689
End posion on genome 2052599
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
taatgcgcgt
tRNA gene sequence 
GCCGCGGTAGCTCAGCTGGCAGAGCGCTCGGCTGTTAACCGAGCGGTCGACGGTTCGAGT
CCGTCCCGCGGCGCtc
Downstream region at tRNA end position 
ttgttttctt
Secondary structure (Cloverleaf model)
>A178000613	Asn	GTT
                   t      GCtc ttgttttctt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     CGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=17 (in A-loop)
ACTTCTAGTTGACAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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