The detailed information of tRNA gene sequence


Sequence ID>A178000644
Genome IDCP012176
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula SARC-M1 [CP012176]
Start position on genome 1724976
End posion on genome 1724878
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
cataagtaga
tRNA gene sequence
GGGGCCGTAGTCTAGCTTGGATTAGGATGCCAGCCTGGGGCGCTGGTGGTCCCGGGTTCA
AATCCCGGCGGCCCCACCt
Downstream region at tRNA end position
tcacaattct
Secondary structure (Cloverleaf model)
>A178000644	Pro	GGG
                   a      ACCt tcacaattct
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A T T A        G     TGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G *
                    G G G
intron: position=38, length=21 (in A-loop)
ATAACTCCCTAACCACCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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