The detailed information of tRNA gene sequence


Sequence ID>A178000656
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 350220
End posion on genome 350347
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gaagtttaca
tRNA gene sequence 
GGGTCCGTGGTCTAGTTGGTTATGACGTCGCCCTTACAAGGCGAAGATCCCCAGTTCGAA
TCTGGGCGGACCCAtac
Downstream region at tRNA end position 
aagcgacatt
Secondary structure (Cloverleaf model)
>A178000656	Val	TAC
                   a      Atac aagcgacatt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
      T G A        G      | | | | |     G
    T       T C T G       C C C A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A *
                    T A C
intron: position=38, length=54 (in A-loop)
ACCGCATCGTGTGCAAAGCATATCTGCTTGAATCACACGCGGAGCGAGTGAGTA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK