The detailed information of tRNA gene sequence


Sequence ID>A178000675
Genome IDCP016804
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HSR6 [CP016804]
Start position on genome 2054983
End posion on genome 2055088
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcgagttcga
tRNA gene sequence 
GGGCACGTAGCTCAGTCCGGACAGAGCGTCGGACTTCTAATCCGACGGTCGCGGGTTCAA
ATCCCGTCGTGCCCGCtc
Downstream region at tRNA end position 
tgcgacgaac
Secondary structure (Cloverleaf model)
>A178000675	Arg	TCT
                   a      GCtc tgcgacgaac
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C T G A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C T
intron: position=38, length=30 (in A-loop)
ACCCGGGCAGCCTGGCTGTGTGGGGGAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK