The detailed information of tRNA gene sequence


Sequence ID>A178000706
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1303015
End posion on genome 1302883
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaccggtaaT
tRNA gene sequence 
GGGCCCATAGCTCAGCCAGGGAGAGTGCTGGGCTCCAGACCCAGTGGTCCAGGGTTCGAA
TCCCTGTGGGCCCATta
Downstream region at tRNA end position 
attcgaaccc
Secondary structure (Cloverleaf model)
>A178000706	Trp	CCA
                   T      ATta attcgaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C A G G G     C
    A       | | | +                 T T
    G       G A G T
      G G A        G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    C C A
intron: position=38, length=57 (in A-loop)
ATGAGCAACGTTGGGTCTTCAGACCGAATGGGATGAAGTACATCTGGAAATGGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK