The detailed information of tRNA gene sequence


Sequence ID>A177000058
Genome IDCP012176
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula SARC-M1 [CP012176]
Start position on genome 16991
End posion on genome 17076
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aattttccat
tRNA gene sequence 
GCCGCTGTAGCTCAGCTGGTAGAGCGCCGGCCTCGTATCCCTGGAGAGATAGCCGGTGGT
CGCGGGTTCAAATCCCGCCGGCGGCTcat
Downstream region at tRNA end position 
tggtgattct
Secondary structure (Cloverleaf model)
>A177000058	Thr	CGT
                   t      Tcat tggtgattct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GAGAGATAGCCGGTGGTC
                    C - G
                    C   T
                    G - C
                    G - C
                    C   C
                  C       T
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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