The detailed information of tRNA gene sequence


Sequence ID>A173000002
Genome IDAM774415
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium salinarum R1 DSM 671 [AM774415]
Start position on genome 1596559
End posion on genome 1596631
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtggtgatac
tRNA gene sequence 
GGGACTGTAGGGTAGCTTGGTATCCTTCGGGCCTTGGGTGCCCGTGACCCCGATTCAAAT
TCGGGCGGTCCCAtac
Downstream region at tRNA end position 
tgtttaatct
Secondary structure (Cloverleaf model)
>A173000002	Pro	TGG
                   c      Atac tgtttaatct
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     G G G C T     A
      C G A        A      | | | | |     A
    T       T G G G       C C C G A     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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