The detailed information of tRNA gene sequence


Sequence ID>A173000233
Genome IDCP009526
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri str. Wiesmoor [CP009526]
Start position on genome 2700990
End posion on genome 2700919
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acaacagatt
tRNA gene sequence 
GCCAAGGTGGCAGAGCGGTTACGCAATCGCCAGCAGAGCGATTCACTCCTGGTTCAAATC
CGGACCTTGGCTttt
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>A173000233	Cys	GCA
                   t      Tttt tttattttta
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G        | + | |     A
      C     G A C G       C C T G G     C
      G         | |                 T T
      G     A C G C
        T T        A     TCACT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  A       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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