The detailed information of tRNA gene sequence


Sequence ID>A179000065
Genome IDCP001400
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus M.14.25 [CP001400]
Start position on genome 1888917
End posion on genome 1888831
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
attgtttctc
tRNA gene sequence
GCCGGAGTAGCTCAGTTGGCAGAGCGCCCGGCTGTTAACCGGGTGGTCGGAGGTTCGAGT
CCTCCCTCCGGCGctt
Downstream region at tRNA end position
tattacttct
Secondary structure (Cloverleaf model)
>A179000065	Asn	GTT
                   c      Gctt tattacttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=14 (in A-loop)
TGCCGGGTGCAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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