The detailed information of tRNA gene sequence


Sequence ID>A179000102
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 378424
End posion on genome 378531
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgatacaggt
tRNA gene sequence
GCCGCCGTAGCTCAGCAGGTTGGAGCGCCGGACTCATAATCCGGAGGTCCCGGGTTCAAA
CCCCGGCGGCGGCACCA
Downstream region at tRNA end position
tctttcctta
Secondary structure (Cloverleaf model)
>A179000102	Met	CAT
                   t      ACCA tctttcctta
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          C A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    A       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T G        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=31 (in A-loop)
CGGCCCTCGCGCCGAGGTCGGGGCTGGGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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