The detailed information of tRNA gene sequence


Sequence ID>A179000128
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1084723
End posion on genome 1084637
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ttttaatgat
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGCGGGGCTTTGGACCCCGCGACCGGGGTTCGAAT
CCCCGCCCGGCTActa
Downstream region at tRNA end position 
ttaagttaat
Secondary structure (Cloverleaf model)
>A179000128	Gln	TTG
                   t      Acta ttaagttaat
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T T G
intron: position=38, length=14 (in A-loop)
TCCGCTCGGAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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