The detailed information of tRNA gene sequence


Sequence ID>A179000144
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 546270
End posion on genome 546147
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aagaaatgag
tRNA gene sequence 
GGGCCCGTGGGGTAGCTGGATATCCTCGGGGCCTCCGGAGCCCTTGACCCGGGTTCGAAT
CCCGGCGGGCCCGctg
Downstream region at tRNA end position 
aagagacacc
Secondary structure (Cloverleaf model)
>A179000144	Arg	CCG
                   g      Gctg aagagacacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      A T A        C     TGAC
                    G + T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    C C G
intron: position=38, length=51 (in A-loop)
AAGCCCCTTTCTAAAGAAAGCGGCTTTACCCGTAAAGAAGGGGTTTAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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