The detailed information of tRNA gene sequence


Sequence ID>A179000145
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 367578
End posion on genome 367458
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ctaaaggcat
tRNA gene sequence 
AGCCCCGTGGTGTAGCGGTCAAGCATGCGGGACTTTGGATCCCGCGACGGGGGTTCGAAT
CCTCCCGGGGCTGcta
Downstream region at tRNA end position 
ctcttctccc
Secondary structure (Cloverleaf model)
>A179000145	Gln	TTG
                   t      Gcta ctcttctccc
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | + | |     G
    G       T G T G       G G G G G     C
    G       + | | +                 T T
    T       G C A T
      C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T T G
intron: position=38, length=48 (in A-loop)
CGAAGCCCCTTTGGAAAAGGTGCTTTACCCCCAAAGGGCTTCGAGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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