The detailed information of tRNA gene sequence


Sequence ID>A179000175
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1330489
End posion on genome 1330581
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cattgttatt
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGGCGGGCTTTGGACCCGTTGACCCCGGTTCGAAT
CCGGGCCCGGCTACCA
Downstream region at tRNA end position 
cctttacatt
Secondary structure (Cloverleaf model)
>A179000175	Gln	TTG
                   t      ACCA cctttacatt
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C C G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T T G
intron: position=38, length=17 (in A-loop)
ACCCAACAGGGGTAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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