The detailed information of tRNA gene sequence


Sequence ID>A179000180
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1885619
End posion on genome 1885711
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaactcacga
tRNA gene sequence 
GCCCCGGTAGTATAGCCCGGTCAAGTATGTGGGCCTTTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGGGGCACCA
Downstream region at tRNA end position 
gatatttcta
Secondary structure (Cloverleaf model)
>A179000180	Glu	TTC
                   a      ACCA gatatttcta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     TGAC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T T C
intron: position=38, length=15 (in A-loop)
AGCTTAGGCGAAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK