The detailed information of tRNA gene sequence


Sequence ID>A179000231
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 123156
End posion on genome 123048
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gattagtcct
tRNA gene sequence 
GCGGGGGTGCCCGAGCCAGGTCAAAGGGGACGGGCTCAGATCCCGTTGGCGAAGGCCTGC
GTGGGTTCGAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
ggggttgaat
Secondary structure (Cloverleaf model)
>A179000231	Leu	CAG
                   t      ACCA ggggttgaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A *
                    C A G
intron: position=38, length=21 (in A-loop)
TGTGCTTTTTGCGCGTGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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