The detailed information of tRNA gene sequence


Sequence ID>A179000241
Genome IDCP002588
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus veneficus SNP6 [CP002588]
Start position on genome 36551
End posion on genome 36655
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actacccaaa
tRNA gene sequence 
GCCCGGGTGGTGTAGCCCGGCCTATCATGCGGGCCTGTCGAGCCCGCGACTCGGGTTCAA
ATCCCGACCCGGGCGctc
Downstream region at tRNA end position 
ctttttcatt
Secondary structure (Cloverleaf model)
>A179000241	Asp	GTC
                   a      Gctc ctttttcatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     A G C C C     A
    C C G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G T C
intron: position=38, length=30 (in A-loop)
CGGGTGTTGTGTTCGGCAGCATCCGCAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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